STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_6820Peptidyl-prolyl cis-trans isomerase D. (324 aa)    
Predicted Functional Partners:
C2E21_0290
HSP20-like chaperone.
   
 0.749
C2E21_6358
Heat shock 70 kDa.
   
 0.573
C2E21_4582
Heat shock 70; Belongs to the heat shock protein 70 family.
   
 0.573
C2E21_1882
Uncharacterized protein.
   
 
  0.547
C2E21_0684
Ubiquitin carboxyl-terminal hydrolase 22 isoform B; Belongs to the peptidase C19 family.
    
  0.531
C2E21_2722
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 
 0.530
C2E21_7469
Heat shock factor HSF8-like.
    
  0.527
C2E21_3245
Fe-S cluster assembly.
    
  0.527
C2E21_9044
Heat shock 90C isoform C.
   
 0.514
C2E21_6240
Fibronectin isoform X1.
   
 0.514
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.