STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_6135IQ and ubiquitin-like domain-containing isoform B. (704 aa)    
Predicted Functional Partners:
C2E21_6142
Dynein light chain.
    
   0.951
C2E21_2454
Coiled-coil domain-containing 65.
  
 
   0.878
C2E21_5669
Growth arrest-specific 8.
  
   0.875
C2E21_6472
Coiled-coil domain-containing 40 isoform A.
  
 
  0.870
C2E21_6875
Restriction endonuclease type II-like.
    
 
 0.835
C2E21_8040
Calmodulin; Belongs to the calmodulin family.
    
  0.826
C2E21_5279
Calmodulin.
    
  0.826
C2E21_2858
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
   0.787
C2E21_1890
Actin.
    
   0.778
C2E21_9207
Epsilon tubulin; Belongs to the tubulin family.
  
 
   0.757
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.