STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_6096Signal recognition particle 43 kDa chloroplastic. (419 aa)    
Predicted Functional Partners:
C2E21_5401
Signal recognition particle 54 kDa chloroplastic isoform B.
   
 0.902
C2E21_8429
Glycerophosphodiesterase GDE1 isoform B.
    
 0.526
C2E21_6883
Gde1p.
    
 0.526
C2E21_1524
WD repeat-containing 90.
    
 0.509
C2E21_3563
Ankyrin repeat.
  
 
  0.502
C2E21_7684
Serine threonine-phosphatase 6 regulatory ankyrin repeat subunit B-like.
  
   
 0.497
C2E21_3564
Ankyrin repeat-containing.
  
 
  0.494
C2E21_8318
ANK_REP_REGION domain-containing protein.
  
 
  0.481
C2E21_7883
Ankyrin repeat.
  
 
  0.479
C2E21_7536
Ankyrin repeat.
  
 
  0.477
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.