STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_5362Vacuolar sorting-associated 26A-like isoform B. (438 aa)    
Predicted Functional Partners:
C2E21_7749
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.997
C2E21_0305
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.996
C2E21_3812
Sorting nexin 1.
   
 
 0.960
C2E21_2611
Sortilin.
    
 
 0.732
C2E21_6758
Ras-related Rab7.
    
 
 0.600
C2E21_8153
Vacuolar sorting-associated 36 isoform A.
    
 
 0.567
C2E21_0572
Photosystem II stability assembly factor chloroplastic.
    
 
 0.525
C2E21_8679
Vacuolar sorting-associated 45-like protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.487
C2E21_6760
Transforming growth factor-beta receptor-associated 1 isoform X1.
      
 0.477
C2E21_9005
Qa-SYP4 Tlg2p Syntaxin 16-type; Belongs to the syntaxin family.
    
 
 0.457
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.