STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_5145Peroxisomal membrane 11C. (459 aa)    
Predicted Functional Partners:
C2E21_8854
Peroxisome biogenesis 19-1-like.
   
 0.942
C2E21_5703
Peroxisomal membrane PEX14-like isoform X1.
    
 0.865
C2E21_2323
Peroxisome biogenesis 12.
   
 0.801
C2E21_8946
Mitochondrial fission 1 A-like.
    
 0.791
C2E21_8315
Peroxisome biogenesis 16.
   
 
 0.760
C2E21_4901
Peroxisomal nicotinamide adenine dinucleotide carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.726
C2E21_3185
ATPase family AAA domain-containing 1-like.
    
 0.613
C2E21_2296
AAA-type ATPase family expressed; Belongs to the AAA ATPase family.
    
 0.613
C2E21_7269
TCHQD class glutathione S-transferase; Belongs to the GST superfamily.
     
 0.599
C2E21_8393
Peroxisome biogenesis 6.
    
 0.584
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.