STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_488050S ribosomal L13; Belongs to the universal ribosomal protein uL13 family. (206 aa)    
Predicted Functional Partners:
C2E21_9118
60S ribosomal L5.
  
 0.983
C2E21_9059
60S ribosomal L7-2.
  
 0.982
C2E21_7488
60S ribosomal L23A; Belongs to the universal ribosomal protein uL23 family.
  
 0.982
C2E21_6779
60S ribosomal L32-1.
   
 0.980
C2E21_0622
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.980
C2E21_6615
60S ribosomal L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.978
C2E21_9490
60S ribosomal L31.
   
 0.977
C2E21_3187
60S ribosomal L24-like.
  
 0.977
C2E21_1268
Regulator of chromosome condensation RCC1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.977
C2E21_4177
60S ribosomal L21-1-like.
   
 0.975
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.