STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_5187Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
C2E21_4750
Phosphatase SGT1a.
    
 0.790
C2E21_5995
Autophagy-related 16.
    
 0.789
C2E21_4378
Uncharacterized protein.
    
 0.780
C2E21_2938
Autophagy protein 5; Required for autophagy.
     
 0.732
C2E21_2656
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
     
 0.727
C2E21_1107
Immunoglobulin E-set.
     
 0.718
C2E21_7529
P53-induced death domain-containing 1 isoform X1.
    
 0.692
C2E21_5427
RAN GTPase-activating 1.
    
 
0.672
C2E21_2198
Pantothenate kinase 2.
    
 0.661
C2E21_9438
Ankyrin repeat PH and SEC7 domain containing.
    
 0.650
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.