STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_5268Uncharacterized protein. (1396 aa)    
Predicted Functional Partners:
C2E21_9339
Signal recognition particle 9 kDa.
   
 0.955
C2E21_5004
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.944
C2E21_5643
Eukaryotic translation elongation factor 1 alpha 2.
   
 
 0.857
C2E21_9520
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.852
C2E21_5401
Signal recognition particle 54 kDa chloroplastic isoform B.
   
 0.852
C2E21_0140
Cell division chloroplastic isoform B.
   
 0.852
C2E21_5860
Signal recognition particle receptor subunit beta-like.
   
 
 0.809
C2E21_7488
60S ribosomal L23A; Belongs to the universal ribosomal protein uL23 family.
   
 0.792
C2E21_8043
Chalcone-flavonone isomerase family protein; Belongs to the chalcone isomerase family.
   
 0.786
C2E21_1106
60S ribosomal L14.
   
  0.772
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.