STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_4552NRDE2-like protein isoform X2. (1743 aa)    
Predicted Functional Partners:
C2E21_1881
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.930
C2E21_9411
Superkiller viralicidic activity 2-like 2 isoform A.
    
 
 0.833
C2E21_0660
Superkiller viralicidic activity 2-like 2 isoform A.
    
 
 0.833
C2E21_4982
TBC1 domain family member 2A.
    
 0.781
C2E21_4665
TBC1 domain family member 8B-like.
    
 0.781
C2E21_3048
Dual specificity phosphatase CDC14A.
    
 
 0.617
C2E21_0058
Root cap family.
    
 
 0.585
C2E21_5823
G patch domain-containing TGH-like isoform X1.
   
 
 0.535
C2E21_0132
DNA-binding HORMA domain-containing.
    
 
 0.533
C2E21_5938
Protein kinase domain-containing protein.
    
 
 0.523
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.