STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_4745La-related 1A isoform X1. (1452 aa)    
Predicted Functional Partners:
C2E21_1150
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.
   
 
 0.603
C2E21_0391
Eukaryotic translation initiation factor 4G.
   
 
 0.546
C2E21_9099
Pumilio-like protein isoform B.
   
 
 0.529
C2E21_4847
Eukaryotic initiation factor.
   
 
 0.529
C2E21_3852
Translation machinery-associated 22.
    
 
 0.489
C2E21_4063
U3 small nucleolar RNA-associated 6-like protein.
   
    0.463
C2E21_3967
Hydroxyproline-rich glyco family isoform 2.
   
 
 0.442
C2E21_2892
Hydroxyneurosporene methyltransferase.
   
 
 0.433
C2E21_1350
KRR1 small subunit processome component.
   
   0.432
C2E21_9572
Nucleolar 6.
   
    0.428
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.