STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_3928Qc-SNARE SYP7-family. (268 aa)    
Predicted Functional Partners:
C2E21_8702
8-amino-7-oxononanoate synthase.
  
 
 0.699
C2E21_8508
Long chain base biosynthesis 1-like.
  
 
 0.699
C2E21_6355
Long chain base biosynthesis 2a.
  
 
 0.699
C2E21_4135
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
   
 
 0.654
C2E21_4860
Qc-snare Syn8 Syntaxin8-family.
     
 0.648
C2E21_8196
AICARFT IMPCHase bienzyme family.
    
 0.632
C2E21_8641
Cinnamyl alcohol dehydrogenase.
  
 0.609
C2E21_5380
Putative mannitol dehydrogenase.
  
 0.609
C2E21_6363
GMP synthase [glutamine-hydrolyzing].
    
  0.600
C2E21_7588
SMP-30 gluconolaconase LRE domain.
  
 
 0.597
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.