STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_3594Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
C2E21_2131
Ribosome biogenesis BMS1-like protein.
   
 
 0.934
C2E21_6255
U3 small nucleolar ribonucleo IMP4.
   
   0.896
C2E21_2389
Periodic tryptophan 2-like protein.
   
 
 0.874
C2E21_0674
AATF isoform X1.
   
 
 0.835
C2E21_3678
DEAD-box ATP-dependent RNA helicase 16.
   
   0.806
C2E21_8116
RNA helicase.
   
   0.797
C2E21_0711
RNA helicase.
   
   0.790
C2E21_7880
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
  
 0.784
C2E21_9285
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  
 0.778
C2E21_1638
Bystin.
   
 
 0.769
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.