STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_3677Phycocyanobilin:ferredoxin oxidoreductase. (290 aa)    
Predicted Functional Partners:
C2E21_7605
Heme oxygenase isoform A.
    
 0.883
C2E21_9148
Oxidoreductase NAD-binding Rossmann fold.
     
 0.674
C2E21_7281
Mitochondrial import inner membrane translocase subunit Tim17 Tim22 Tim23 family isoform A.
     
 0.674
C2E21_0006
Hexose phosphate transport isoform C.
      
 0.601
C2E21_7923
Carotene isomerase.
      
 0.549
C2E21_8196
AICARFT IMPCHase bienzyme family.
      
 0.524
C2E21_1920
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
      
 0.520
C2E21_8328
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
      
 0.472
C2E21_5013
Uncharacterized protein.
  
     0.465
C2E21_4288
Uncharacterized protein.
  
     0.458
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.