STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_3140Superoxide dismutase [Fe]. (381 aa)    
Predicted Functional Partners:
C2E21_3730
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.764
C2E21_7566
39S ribosomal mitochondrial.
   
   0.752
C2E21_3628
30S ribosomal S18.
   
 
 0.743
C2E21_9260
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 
 0.738
C2E21_3910
50S ribosomal L3-chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.738
C2E21_6590
28S ribosomal mitochondrial.
   
   0.707
C2E21_4478
30S ribosomal S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.693
C2E21_7572
54S ribosomal mitochondrial.
   
   0.690
C2E21_3080
28S ribosomal mitochondrial.
   
 
 0.687
C2E21_6377
50S ribosomal L23 isoform A.
   
 
 0.686
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.