STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_2962Voltage-gated ion channel superfamily. (117 aa)    
Predicted Functional Partners:
C2E21_3270
Tetratricopeptide repeat 37.
    
 0.655
C2E21_9117
Ubiquitin conjugating enzyme family.
    
  0.543
C2E21_4983
Baculoviral IAP repeat-containing 6-like.
    
  0.543
C2E21_4416
Putative ubiquitin-conjugating enzyme E2.
    
  0.543
C2E21_3511
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.502
C2E21_0233
RNA polymerase-associated CTR9-like protein.
    
 0.496
C2E21_3026
RNA polymerase-associated LEO1 isoform X1.
    
 0.495
C2E21_7860
RNA polymerase II-associated factor 1-like protein.
   
 0.487
C2E21_6184
HBS1 isoform X1 isoform B.
    
 0.482
C2E21_1781
Putative ATP-dependent RNA helicase DDX20.
   
 0.470
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.