STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_2144Amine oxidase. (537 aa)    
Predicted Functional Partners:
C2E21_8782
Phytoene synthase.
   
 
 0.518
C2E21_0714
Squalene synthase isoform B.
   
 
 0.518
C2E21_9225
NADH dehydrogenase (Ubiquinone) complex assembly factor 6.
   
 
 0.488
C2E21_3911
Amine oxidase.
   
 
 0.460
C2E21_4076
Outer envelope mitochondrial.
   
 
 0.454
C2E21_7829
SNF2 family DNA-dependent ATPase.
    
 0.435
C2E21_3088
CHROMATIN REMODELING 4-like isoform X1.
    
 0.435
C2E21_0505
CHD3-type chromatin-remodeling factor PICKLE.
    
 0.435
C2E21_7322
Adenine nucleotide alpha hydrolase.
    
  0.412
C2E21_7110
Non-histone chromosomal 6.
    
  0.412
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.