STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_2669Chloroplast inner envelope translocon. (1377 aa)    
Predicted Functional Partners:
C2E21_8047
SIN3 component of histone deacetylase complex isoform B.
    
 
 0.813
C2E21_2631
PHD-finger family homeodomain.
   
 
 0.797
C2E21_9061
TIC chloroplastic.
    
 
 0.787
C2E21_8278
ADP-ribosyl glycohydrolase.
    
 
 0.656
C2E21_3775
Embryo defective 2410 isoform 2.
  
   
 0.654
C2E21_4337
Chloroplast envelope translocase family.
  
 
 0.583
C2E21_3667
Breast cancer type 2 susceptibility.
    
 
 0.579
C2E21_7564
Transcription factor bHLH140.
      
 0.562
C2E21_7710
Fructose-1,6-cytosolic; Belongs to the FBPase class 1 family.
      
 0.557
C2E21_5135
Chloroplast envelope translocase family.
      
 0.549
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.