STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_2485Ribosomal L17; Belongs to the bacterial ribosomal protein bL17 family. (148 aa)    
Predicted Functional Partners:
C2E21_9059
60S ribosomal L7-2.
  
 
 0.977
C2E21_9118
60S ribosomal L5.
  
 
 0.977
C2E21_8771
40S ribosomal S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.977
C2E21_8815
40S ribosomal S3-3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.977
C2E21_7948
U3 small nucleolar ribonucleo IMP3.
  
 
 0.977
C2E21_7240
40S ribosomal S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.977
C2E21_7488
60S ribosomal L23A; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.977
C2E21_6615
60S ribosomal L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.977
C2E21_6348
60S ribosomal L8.
  
 
 0.977
C2E21_6174
40S ribosomal S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.977
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.