STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_2089Phosphatase 1 regulatory subunit SDS22. (598 aa)    
Predicted Functional Partners:
C2E21_2338
Pre-mRNA-splicing factor CWC22-like protein isoform X1.
    
 0.894
C2E21_0145
Ribosomal--alanine acetyltransferase.
    
 0.894
C2E21_2346
Glutamate receptor.
    
 0.715
C2E21_4147
Type 1 phosphatases regulator ypi1.
    
 
 0.596
C2E21_8807
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.535
C2E21_7446
Ser thr phosphatase.
   
 0.535
C2E21_4757
Shewanella phosphatase 2.
   
 0.535
C2E21_1342
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.535
C2E21_1614
Serine/threonine-protein phosphatase.
   
 0.535
C2E21_1179
Leucine rich repeat.
  
 
   0.472
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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