STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_2387LYR motif-containing 9; Belongs to the complex I LYR family. (86 aa)    
Predicted Functional Partners:
C2E21_3341
tRNA (Guanine-N(7)-)-methyltransferase isoform B.
   
  
 0.637
C2E21_0437
tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6.
   
  
 0.623
C2E21_8214
tRNA:m(4)X modification enzyme TRM13-like protein.
   
  
 0.546
C2E21_2244
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.543
C2E21_0278
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.506
C2E21_7797
Methyltransferase TARBP1.
   
  
 0.501
C2E21_5944
tRNA (adenine(58)-N(1))-methyltransferase.
   
  
 0.449
C2E21_4634
Spore coat.
   
  
 0.449
C2E21_8524
Methyltransferase 5 isoform X1.
      
 0.446
C2E21_8136
tRNA pseudouridine synthase.
   
  
 0.440
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.