STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_1364Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
C2E21_6076
Uncharacterized protein.
    
 0.786
C2E21_5734
Ferric-chelate reductase.
   
 0.670
C2E21_1791
Putative membrane-like.
   
 0.670
C2E21_1068
Respiratory burst oxidase-like protein B.
   
 0.670
C2E21_0396
Ferric reductase.
   
 0.670
C2E21_2338
Pre-mRNA-splicing factor CWC22-like protein isoform X1.
    
  0.573
C2E21_0145
Ribosomal--alanine acetyltransferase.
    
  0.573
C2E21_4507
Radical SAM domain isoform B.
   
  0.563
C2E21_8501
PHD finger protein isoform C.
     
 0.529
C2E21_5739
RNA binding.
     
 0.529
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.