STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_1352Usp domain-containing protein. (628 aa)    
Predicted Functional Partners:
C2E21_2263
Histone H2A deubiquitinase MYSM1 isoform A.
    
 0.991
C2E21_5299
Histone acetyltransferase complex component.
   
 0.944
C2E21_9070
Transcription initiation factor TFIID subunit 9.
   
 0.942
C2E21_8811
Transformation transcription domain-associated.
    
 0.940
C2E21_0684
Ubiquitin carboxyl-terminal hydrolase 22 isoform B; Belongs to the peptidase C19 family.
    
 0.935
C2E21_2486
TATA-box-binding 2.
    
 0.926
C2E21_7750
Transcription initiation factor TFIID subunit 12 isoform X2.
    
 0.892
C2E21_8820
Transcription initiation factor TFIID subunit 6-like isoform X1.
    
 0.884
C2E21_4712
SAGA-associated factor 11.
    
 
 0.809
C2E21_8027
Uncharacterized protein.
    
 0.782
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.