STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_072140S ribosomal S2-4; Belongs to the universal ribosomal protein uS5 family. (513 aa)    
Predicted Functional Partners:
C2E21_7369
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.973
C2E21_8815
40S ribosomal S3-3; Belongs to the universal ribosomal protein uS3 family.
  
 0.969
C2E21_1238
40S ribosomal S21-2.
   
 0.969
C2E21_6174
40S ribosomal S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.968
C2E21_4711
40S ribosomal S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.968
C2E21_7240
40S ribosomal S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.967
C2E21_5844
40S ribosomal S14-2; Belongs to the universal ribosomal protein uS11 family.
  
 0.967
C2E21_3829
40S ribosomal S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.967
C2E21_8771
40S ribosomal S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.966
C2E21_2453
40S ribosomal S19-1.
   
 0.966
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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