STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_1285Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
C2E21_6127
Putative chromatin remodeling Snf Swi complex subunit.
   
 0.889
C2E21_2256
SWI SNF complex component SNF12-like protein.
   
 0.881
C2E21_2263
Histone H2A deubiquitinase MYSM1 isoform A.
   
 0.852
C2E21_0106
Uncharacterized protein.
    
 0.800
C2E21_4506
Bromodomain-containing 9.
    
 0.785
C2E21_8653
Actin-related 4; Belongs to the actin family.
    
 0.770
C2E21_8651
Actin-related 4.
    
 0.770
C2E21_3995
SWI SNF complex.
    
 0.769
C2E21_1119
Upstream activation factor subunit spp27.
    
 0.762
C2E21_0618
U1 small nuclear ribonucleo isoform B.
    
  0.640
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.