STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_1095Ribulose-phosphate 3-cytoplasmic isoform. (1054 aa)    
Predicted Functional Partners:
C2E21_3956
Transketolase 7.
  
 0.996
C2E21_7425
Phosphoribulokinase.
  
 
 0.993
C2E21_4453
Ribose-5-phosphate isomerase.
  
 0.990
C2E21_4587
Ribulose-phosphate 3-chloroplastic.
  
  
 
0.972
C2E21_2342
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
   
 0.956
C2E21_7922
Putative ribose-5-phosphate isomerase chloroplastic.
  
 0.954
C2E21_4124
Transaldolase.
  
 0.922
C2E21_0176
Putative transaldolase.
  
 0.922
C2E21_0074
Enolase.
   
 0.910
C2E21_5298
Sedoheptulose-1,7-chloroplastic.
  
 
 0.845
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.