STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_0714Squalene synthase isoform B. (842 aa)    
Predicted Functional Partners:
C2E21_7155
Geranylgeranyl diphosphate synthase.
  
 0.966
C2E21_0989
Farnesyl diphosphate synthase.
  
 0.959
C2E21_0548
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.949
C2E21_7994
Farnesyltransferase geranylgeranyltransferase type-1 subunit alpha.
     
 0.946
C2E21_4300
Dehydrodolichyl diphosphate syntase complex subunit DHDDS.
   
 
 0.938
C2E21_2005
Farnesyltransferase subunit beta.
     
 0.934
C2E21_8698
Sterol desaturase; Belongs to the sterol desaturase family.
  
 0.929
C2E21_9554
Dehydrodolichyl diphosphate syntase complex subunit NUS1-like isoform X1.
   
 
 0.894
C2E21_9001
CMF receptor CMFR1.
   
 
 0.880
C2E21_6329
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.844
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.