STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_1099DNA repair and recombination RAD54-like. (2870 aa)    
Predicted Functional Partners:
C2E21_1215
Fanconi anemia group M isoform X3.
   
 0.820
C2E21_2931
Chromatin structure-remodeling complex SYD-like isoform X1.
   
0.756
C2E21_4798
DNA repair RAD51-like protein; Belongs to the RecA family.
   
 
 0.693
C2E21_9301
Putative ATP-dependent DNA helicase.
   
 
 0.668
C2E21_7665
DNA ligase 1 isoform X1.
   
 0.659
C2E21_0963
DNA repair RAD51-like protein 4 isoform X1.
   
 
 0.630
C2E21_6364
Bifunctional polynucleotide phosphatase kinase.
   
 0.627
C2E21_3371
DNA recombination repair; Belongs to the RecA family.
   
 
 0.625
C2E21_3835
Exonuclease 1.
   
 0.594
C2E21_1031
Exonuclease 1.
   
 0.591
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.