STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_0140Cell division chloroplastic isoform B. (395 aa)    
Predicted Functional Partners:
C2E21_9339
Signal recognition particle 9 kDa.
   
 0.934
C2E21_5004
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.932
C2E21_5643
Eukaryotic translation elongation factor 1 alpha 2.
  
0.924
C2E21_9048
60S ribosomal L18-3.
   
 
 0.869
C2E21_2494
60S ribosomal L13a-4; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.868
C2E21_7369
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.866
C2E21_5401
Signal recognition particle 54 kDa chloroplastic isoform B.
  
 
 
0.859
C2E21_7948
U3 small nucleolar ribonucleo IMP3.
  
 
 0.857
C2E21_5268
Uncharacterized protein.
   
 0.852
C2E21_4038
Signal recognition particle 19 kDa-like.
   
 0.852
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.