STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_0637GTPase Der; Belongs to the complex I LYR family. (724 aa)    
Predicted Functional Partners:
C2E21_7207
tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme isoform B.
  
 0.806
C2E21_4605
tRNA uridine 5-carboxymethylaminomethyl modification enzyme.
  
 0.806
C2E21_7052
Endoplasmic reticulum-Golgi intermediate compartment 3.
  
 0.798
C2E21_7103
Endoplasmic reticulum-Golgi intermediate compartment 3.
  
 0.798
C2E21_3074
Disulfide-isomerase 5-4.
  
 0.798
C2E21_2700
GTP-binding protein.
    
 
 0.648
C2E21_8733
tRNA-specific 2-thiouridylase.
  
 0.615
C2E21_7428
tRNA 2-thiouridine(34) synthase isoform A.
  
 0.615
C2E21_6137
Multisubstrate pseudouridine synthase 7-like.
   
   0.567
C2E21_8766
50S ribosomal chloroplastic; Belongs to the universal ribosomal protein uL24 family.
    
   0.561
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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