STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_0493X-linked retinitis pigmentosa GTPase regulator-interacting 1. (533 aa)    
Predicted Functional Partners:
C2E21_0058
Root cap family.
    
 0.686
C2E21_5251
Rho GTPase-activating 4 isoform X3.
    
  0.613
C2E21_8758
Minor pollen allergen Che a 2; Belongs to the profilin family.
    
 0.606
C2E21_7021
Cold shock domain-containing E1.
   
 0.551
C2E21_4279
Ras-related RABA1f.
   
 0.551
C2E21_2008
Rab family GTPase.
   
 0.551
C2E21_8572
Kinesin-like calmodulin-binding; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.540
C2E21_9287
Ras-related RABB1c.
   
 0.515
C2E21_6751
Arf6-family small GTPase.
   
 0.515
C2E21_6242
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
 0.515
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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