STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107742495C-terminal-binding protein 1 isoform X1. (465 aa)    
Predicted Functional Partners:
LOC107709289
Probable histone deacetylase 1-B isoform X1.
    
 0.936
LOC107745719
Probable histone deacetylase 1-B isoform X1.
    
 0.936
LOC107740033
Phosphoserine aminotransferase-like.
  
 0.930
psat1
Phosphoserine aminotransferase.
  
 0.930
ENSSRHP00000002489
Lymphoid enhancer-binding factor 1-like isoform X1.
    
 0.831
LOC107747791
Transcription factor 7-like 1-B.
    
 0.825
LOC107721095
Transcription factor 7-like 1-B.
    
 0.825
ENSSRHP00000068404
Transcription factor 7-like 1-A.
    
 0.825
ENSSRHP00000084196
Transcription factor 7-like 1-A.
    
 0.825
LOC107755529
Transcription factor 7-like 2 isoform X1.
    
 0.825
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.