STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107722518LIM zinc-binding domain-containing Nebulette-like isoform X1. (276 aa)    
Predicted Functional Partners:
ENSSRHP00000071314
Calcium channel, voltage-dependent, beta 2b.
      
 0.617
LOC107742119
ADP-ribosylation factor-like protein 5B.
    
 
 0.519
ENSSRHP00000071669
Si:ch211-106h4.6.
      
 0.519
ENSSRHP00000073299
Si:ch211-106h4.6.
      
 0.519
ARL5B
ADP ribosylation factor like GTPase 5B.
    
 
 0.519
LOC107725054
Telethonin-like.
   
 
 0.448
LOC107727457
Telethonin-like.
   
 
 0.448
ENSSRHP00000000423
Zyxin-like.
    
 
 0.443
ENSSRHP00000025780
Zyxin.
    
 
 0.443
ENSSRHP00000014409
Dystrophin-like.
     
 0.413
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.