ENSSRHP00000002607 protein (Sinocyclocheilus rhinocerous)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSRHP00000002607

Fat storage-inducing transmembrane protein 1-like. (291 aa)

Predicted Functional Partners:

LOC107752938

0.619

ENSSRHP00000053253

0.558

ENSSRHP00000053255

0.558

LOC107753943

0.558

LOC107757862

0.515

ENSSRHP00000053099

0.429

ENSSRHP00000057915

0.429

ENSSRHP00000058545

0.429

LOC107750479

0.429

lrrc2

0.422

Your Current Organism:

Sinocyclocheilus rhinocerous

NCBI taxonomy Id: 307959
Other names: S. rhinocerous

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSRHP00000002607	ENSSRHP00000053099	ENSSRHP00000002607	ENSSRHP00000053099	Fat storage-inducing transmembrane protein 1-like.	Cartilage intermediate layer protein 1-like.	0.429
ENSSRHP00000002607	ENSSRHP00000053253	ENSSRHP00000002607	ENSSRHP00000053253	Fat storage-inducing transmembrane protein 1-like.	Cysteine and histidine-rich domain-containing protein 1-like.	0.558
ENSSRHP00000002607	ENSSRHP00000053255	ENSSRHP00000002607	ENSSRHP00000053255	Fat storage-inducing transmembrane protein 1-like.	annotation not available	0.558
ENSSRHP00000002607	ENSSRHP00000057915	ENSSRHP00000002607	ENSSRHP00000057915	Fat storage-inducing transmembrane protein 1-like.	Cartilage intermediate layer protein 1-like.	0.429
ENSSRHP00000002607	ENSSRHP00000058545	ENSSRHP00000002607	ENSSRHP00000058545	Fat storage-inducing transmembrane protein 1-like.	Cartilage intermediate layer protein 1-like.	0.429
ENSSRHP00000002607	LOC107750479	ENSSRHP00000002607	ENSSRHP00000079047	Fat storage-inducing transmembrane protein 1-like.	Cartilage intermediate layer protein 1-like isoform X1.	0.429
ENSSRHP00000002607	LOC107752938	ENSSRHP00000002607	ENSSRHP00000103483	Fat storage-inducing transmembrane protein 1-like.	Glutamic acid-rich protein-like isoform X1.	0.619
ENSSRHP00000002607	LOC107753943	ENSSRHP00000002607	ENSSRHP00000061857	Fat storage-inducing transmembrane protein 1-like.	Cysteine and histidine-rich domain-containing protein 1-like.	0.558
ENSSRHP00000002607	LOC107757862	ENSSRHP00000002607	ENSSRHP00000076562	Fat storage-inducing transmembrane protein 1-like.	Phosphatidic acid-selective phospholipase A1.	0.515
ENSSRHP00000002607	lrrc2	ENSSRHP00000002607	ENSSRHP00000007134	Fat storage-inducing transmembrane protein 1-like.	Leucine-rich repeat-containing protein 2.	0.422
ENSSRHP00000053099	ENSSRHP00000002607	ENSSRHP00000053099	ENSSRHP00000002607	Cartilage intermediate layer protein 1-like.	Fat storage-inducing transmembrane protein 1-like.	0.429
ENSSRHP00000053253	ENSSRHP00000002607	ENSSRHP00000053253	ENSSRHP00000002607	Cysteine and histidine-rich domain-containing protein 1-like.	Fat storage-inducing transmembrane protein 1-like.	0.558
ENSSRHP00000053255	ENSSRHP00000002607	ENSSRHP00000053255	ENSSRHP00000002607	annotation not available	Fat storage-inducing transmembrane protein 1-like.	0.558
ENSSRHP00000057915	ENSSRHP00000002607	ENSSRHP00000057915	ENSSRHP00000002607	Cartilage intermediate layer protein 1-like.	Fat storage-inducing transmembrane protein 1-like.	0.429
ENSSRHP00000058545	ENSSRHP00000002607	ENSSRHP00000058545	ENSSRHP00000002607	Cartilage intermediate layer protein 1-like.	Fat storage-inducing transmembrane protein 1-like.	0.429
LOC107750479	ENSSRHP00000002607	ENSSRHP00000079047	ENSSRHP00000002607	Cartilage intermediate layer protein 1-like isoform X1.	Fat storage-inducing transmembrane protein 1-like.	0.429
LOC107752938	ENSSRHP00000002607	ENSSRHP00000103483	ENSSRHP00000002607	Glutamic acid-rich protein-like isoform X1.	Fat storage-inducing transmembrane protein 1-like.	0.619
LOC107753943	ENSSRHP00000002607	ENSSRHP00000061857	ENSSRHP00000002607	Cysteine and histidine-rich domain-containing protein 1-like.	Fat storage-inducing transmembrane protein 1-like.	0.558
LOC107757862	ENSSRHP00000002607	ENSSRHP00000076562	ENSSRHP00000002607	Phosphatidic acid-selective phospholipase A1.	Fat storage-inducing transmembrane protein 1-like.	0.515
lrrc2	ENSSRHP00000002607	ENSSRHP00000007134	ENSSRHP00000002607	Leucine-rich repeat-containing protein 2.	Fat storage-inducing transmembrane protein 1-like.	0.422