STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107705989Mitoguardin-2-like. (593 aa)    
Predicted Functional Partners:
LOC107708777
Mitoguardin-1-like.
  
 
 
0.710
ENSSRHP00000097677
LOW QUALITY PROTEIN: mitoguardin-1-like.
  
 
 
0.709
ENSSRHP00000020479
Nexilin (F actin binding protein).
     
 0.682
LOC107750547
Nexilin-like.
     
 0.682
ENSSRHP00000030752
RNA pseudouridylate synthase domain-containing protein 4.
   
  
 0.636
ENSSRHP00000102336
RNA pseudouridine synthase D4.
   
  
 0.636
dcxr
L-xylulose reductase.
      
 0.621
ENSSRHP00000060356
Vacuolar protein sorting-associated protein 13D-like.
      
 0.614
ENSSRHP00000101958
Circadian-associated transcriptional repressor-like.
      
 0.597
ENSSRHP00000046434
Surfeit 6.
     
 0.583
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.