STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107708322WD repeat-containing protein 26. (613 aa)    
Predicted Functional Partners:
ENSSRHP00000052724
Thyroid hormone receptor interactor 12.
   
  
 0.976
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
 0.976
LOC107749738
E3 ubiquitin-protein transferase RMND5.
  
 
 0.966
LOC107731252
Glucose-induced degradation protein 8 homolog.
    
 
 0.935
Gid8
Glucose-induced degradation protein 8 homolog.
    
 
 0.935
ENSSRHP00000024527
Armadillo repeat-containing protein 8-like.
    
 
 0.910
LOC107733643
Armadillo repeat-containing protein 8.
    
 
 0.910
RANBP10
Ran-binding protein 10 isoform X1.
   
 
 0.909
ENSSRHP00000046476
LOW QUALITY PROTEIN: ran-binding protein 10-like.
   
 
 0.909
ENSSRHP00000071708
Ran-binding protein 9/10.
   
 
 0.909
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.