STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000004679Major histocompatibility complex class I-related gene protein-like. (252 aa)    
Predicted Functional Partners:
ENSSRHP00000104165
Uncharacterized protein LOC107721945.
     
  0.900
LOC107728367
Beta-2-microglobulin-like.
   
 0.814
LOC107725654
Beta-2-microglobulin-like.
   
 0.803
ENSSRHP00000072404
Beta-2-microglobulin.
   
 0.803
LOC107710837
Beta-2-microglobulin-like.
   
 0.801
Cd8a
T-cell surface glycoprotein CD8 alpha chain.
   
 0.736
LOC107752434
Calreticulin-like.
   
 
 0.707
LOC107723933
Calreticulin-like.
   
 
  0.706
ENSSRHP00000047616
Calreticulin-like.
   
 
  0.706
LOC107742789
Calreticulin-like.
   
 
  0.706
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.