STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107724876Derlin-2-like. (251 aa)    
Predicted Functional Partners:
ENSSRHP00000060629
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.963
LOC107721334
Protein sel-1 homolog 1-like.
   
 0.963
ENSSRHP00000078843
Protein sel-1 homolog 3-like.
   
 0.947
ENSSRHP00000026742
Katanin p60 subunit A-like 2.
   
 0.927
ENSSRHP00000088264
Katanin p60 subunit A-like 2.
   
 0.927
DERL1
Derlin-1.
    
0.925
LOC107714924
Derlin-1-like.
    
0.925
ENSSRHP00000032914
Protein OS-9-like isoform X1.
    
 0.904
LOC107711069
Protein OS-9-like isoform X1.
    
 0.904
ENSSRHP00000066179
Endoplasmic reticulum lectin 1-like.
    
 0.902
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.