STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107715799Protein FAM212A-like. (308 aa)    
Predicted Functional Partners:
LOC107737358
Sulfite oxidase-like.
      
 0.689
ENSSRHP00000066465
annotation not available
      
 0.689
ENSSRHP00000004820
Eukaryotic translation initiation factor 4, gamma 2a.
      
 0.613
ENSSRHP00000050122
Eukaryotic translation initiation factor 4 gamma 2-like.
      
 0.613
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
      
 0.609
LOC107744790
Serine/threonine-protein kinase PAK 4-like isoform X1.
    
 
 0.604
LOC107743662
Serine/threonine-protein kinase PAK 4-like isoform X1.
    
 
 0.604
ENSSRHP00000062621
annotation not available
    
 
 0.604
ENSSRHP00000073973
P21 protein (Cdc42/Rac)-activated kinase 6a.
    
 
 0.604
ENSSRHP00000080645
P21 protein (Cdc42/Rac)-activated kinase 6a.
    
 
 0.604
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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