STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000008141Solute carrier family 26 member 6. (760 aa)    
Predicted Functional Partners:
ND4
NADH-ubiquinone oxidoreductase chain 4.
  
 
 0.716
CYTB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 
 0.577
ENSSRHP00000067790
Heme-binding protein 1-like.
    
 
 0.577
ENSSRHP00000090961
Heme-binding protein soul4.
    
 
 0.577
ENSSRHP00000025323
annotation not available
  
   0.570
ENSSRHP00000103516
MRE11 homolog A, double strand break repair nuclease.
  
   0.570
LOC107722638
LYR motif-containing protein 4.
    
 
 0.547
LOC107713738
LYR motif-containing protein 4B-like.
    
 
 0.547
ENSSRHP00000019992
LYR motif-containing protein 4-like.
    
 
 0.547
ENSSRHP00000077266
annotation not available
    
 
 0.547
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.