STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107729487Ferritin, middle subunit-like. (178 aa)    
Predicted Functional Partners:
ENSSRHP00000089514
Nuclear receptor coactivator 4-like isoform X1.
   
 0.951
LOC107739471
Nuclear receptor coactivator 4-like isoform X1.
     
  0.900
ENSSRHP00000023614
LOW QUALITY PROTEIN: cyclin-G-associated kinase-like.
     
 0.646
ENSSRHP00000027536
Cyclin-G-associated kinase-like.
     
 0.646
ENSSRHP00000030601
Cyclin G associated kinase.
     
 0.646
ENSSRHP00000003143
Peroxiredoxin-4-like.
  
  
 0.504
Prdx4
Peroxiredoxin 2/4.
  
  
 0.504
LOC107757043
Peroxiredoxin-1-like.
  
  
 0.464
LOC107711433
Protein FAM45A.
  
  
 0.464
ENSSRHP00000033259
Thioredoxin-dependent peroxide reductase, mitochondrial-like.
  
  
 0.464
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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