STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asphd2Aspartate beta-hydroxylase domain-containing protein 2. (372 aa)    
Predicted Functional Partners:
ENSSRHP00000009840
Hermansky-Pudlak syndrome 4 protein-like.
      
 0.616
LOC107712456
Hermansky-Pudlak syndrome 4 protein-like isoform X1.
      
 0.616
ENSSRHP00000028279
SRR1 domain containing.
      
 0.520
ENSSRHP00000087549
SRR1-like protein.
      
 0.520
acbd6
Acyl-CoA-binding domain-containing protein 6 isoform X1.
      
 0.518
LOC107730786
Transmembrane protein 53.
      
 0.518
LOC107733878
Transmembrane protein 53-like.
      
 0.518
LOC107758008
acyl-CoA-binding domain-containing protein 6-like.
      
 0.518
ENSSRHP00000030674
GON-4-like protein.
      
 0.465
ENSSRHP00000054664
GON-4-like protein.
      
 0.465
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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