STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107716413PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like. (855 aa)    
Predicted Functional Partners:
LOC107723747
PAB-dependent poly(A)-specific ribonuclease subunit PAN2-like isoform X1.
    
 0.997
LOC107756401
PAB-dependent poly(A)-specific ribonuclease subunit PAN2-like isoform X1.
    
 0.997
ENSSRHP00000000654
Interferon-stimulated 20 kDa exonuclease-like 2.
    
 0.893
LOC107720906
RNA exonuclease 4-like.
    
 0.893
LOC107731267
RNA exonuclease 1 homolog isoform X1.
    
 0.893
LOC107742548
RNA exonuclease 1 homolog isoform X1.
    
 0.893
LOC107716675
Apoptosis-enhancing nuclease-like.
    
 0.893
LOC107717775
Interferon-stimulated 20 kDa exonuclease-like 2.
    
 0.893
ENSSRHP00000093903
RNA exonuclease 1 homolog.
    
 0.893
LOC107741778
Interferon-stimulated 20 kDa exonuclease-like 2.
    
 0.893
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.