STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107735471Charged multivesicular body protein 4c-like. (83 aa)    
Predicted Functional Partners:
ENSSRHP00000030488
Charged multivesicular body protein 3.
   
 0.925
LOC107732730
Charged multivesicular body protein 3-like.
   
 0.925
LOC107727322
Charged multivesicular body protein 2a-like.
   
 0.903
LOC107706891
Charged multivesicular body protein 2A.
   
 0.903
ENSSRHP00000062191
Vacuolar protein-sorting-associated protein 25-like.
    
 0.898
ENSSRHP00000051514
Tyrosine-protein phosphatase non-receptor type 23-like.
   
 0.893
ENSSRHP00000066614
Tyrosine-protein phosphatase non-receptor type 23-like isoform X1.
   
 0.893
ENSSRHP00000069650
Tyrosine-protein phosphatase non-receptor type 23-like.
   
 0.893
ENSSRHP00000070537
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 0.893
LOC107730168
Vacuolar protein sorting-associated protein IST1.
    
 0.862
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.