STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000011139Sodium channel protein type 2 subunit alpha-like isoform X1. (1995 aa)    
Predicted Functional Partners:
ENSSRHP00000032663
Protein unc-79 homolog.
   
 0.992
ENSSRHP00000092275
Sodium channel, voltage-gated, type II, beta.
   
 0.770
ENSSRHP00000098296
Voltage-gated sodium channel type II beta.
   
 0.770
ENSSRHP00000023204
annotation not available
   
 0.696
IFT122
Intraflagellar transport protein 122 homolog.
   
 0.696
LOC107750430
WD repeat-containing protein 19-like isoform X1.
    
 0.689
ENSSRHP00000076928
WD repeat domain 19.
    
 0.689
ENSSRHP00000008043
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.687
ENSSRHP00000030008
Intraflagellar transport protein 140 homolog.
    
 0.687
ENSSRHP00000000950
Sodium channel subunit beta-1-like isoform X1.
   
 0.658
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.