STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACSF3Acyl-CoA synthetase family member 3, mitochondrial isoform X1. (585 aa)    
Predicted Functional Partners:
med1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.972
Med23
Mediator of RNA polymerase II transcription subunit 23.
   
 0.965
ENSSRHP00000045814
Fatty acid synthase, animal type.
  
 0.956
Fasn
Fatty acid synthase, animal type.
  
 0.956
med20
Mediator of RNA polymerase II transcription subunit 20.
    
 0.953
ENSSRHP00000102921
Mediator complex subunit 25.
   
 0.950
ENSSRHP00000055259
Methylmalonyl-CoA epimerase, mitochondrial-like.
  
 
 0.945
LOC107750491
Methylmalonyl-CoA epimerase, mitochondrial-like isoform X1.
  
 
 0.945
LOC107756768
Mediator of RNA polymerase II transcription subunit 14-like isoform X1.
   
 0.942
ENSSRHP00000070902
Mediator of RNA polymerase II transcription subunit 14-like.
   
 0.942
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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