STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000014030Lysine-specific demethylase 6B-like. (1964 aa)    
Predicted Functional Partners:
ATP6
F-type H+-transporting ATPase subunit a.
  
 0.984
LOC107744423
LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 6.
   
 0.982
ENSSRHP00000033280
Retinoblastoma binding protein 5.
    
 0.973
ENSSRHP00000097744
Retinoblastoma-binding protein 5-like.
    
 0.973
ENSSRHP00000088688
Set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.972
ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.972
LOC107737161
ATP synthase subunit alpha, mitochondrial-like.
  
 0.959
LOC107705972
F-type H+-transporting ATPase subunit alpha.
  
 0.959
LOC107719603
ATP synthase subunit delta, mitochondrial-like.
  
 0.957
LOC107728581
ATP synthase subunit delta, mitochondrial-like isoform X1.
  
 0.957
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.