STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000014436HORMA domain-containing protein 1-like isoform X1. (109 aa)    
Predicted Functional Partners:
ENSSRHP00000046747
DNA meiotic recombinase 1.
   
 
 0.698
ENSSRHP00000053869
Meiotic recombination protein DMC1/LIM15 homolog.
   
 
 0.698
spo11
Meiotic recombination protein SPO11 isoform X1.
   
  
 0.696
Fancm
Fanconi anemia group M protein.
      
 0.688
ENSSRHP00000077763
Testis expressed 11.
   
 
 0.669
ENSSRHP00000049950
Synaptonemal complex protein 1.
   
 
 0.657
LOC107754445
Pachytene checkpoint protein 2 homolog isoform X1.
   
 
 0.648
ENSSRHP00000056383
annotation not available
   
 
 0.648
YTHDC2
YTH domain containing 2.
      
 0.643
ENSSRHP00000094615
Extra spindle pole bodies like 1, separase.
   
  
 0.617
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.