STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000016553Cathepsin L1-like. (356 aa)    
Predicted Functional Partners:
LOC107730483
Cathepsin D isoform X1.
   
 0.731
LOC107740314
Cathepsin D-like.
   
 0.731
LOC107723590
Cathepsin D-like.
   
 0.712
LOC107748792
Cathepsin D-like.
   
 0.712
LOC107729657
Apoptosis regulator Bcl-2-like.
   
 
 0.688
LOC107757715
Apoptosis regulator Bcl-2-like.
   
 
 0.688
xiap
E3 ubiquitin-protein ligase XIAP isoform X1.
     
 0.666
LOC107731450
Baculoviral IAP repeat-containing protein 2-like isoform X1.
     
 0.666
LOC107718959
Baculoviral IAP repeat-containing protein 2-like isoform X1.
     
 0.666
LOC107722191
Baculoviral IAP repeat-containing protein 5.2-like.
     
 0.659
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.