STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107749451Ski oncogene-like. (703 aa)    
Predicted Functional Partners:
ENSSRHP00000017091
Si:dkey-222b8.1.
   
 0.772
LOC107741365
Mothers against decapentaplegic homolog 4.
   
 0.772
ENSSRHP00000046206
SMAD family member 4b.
   
 0.772
ENSSRHP00000059529
Mothers against decapentaplegic homolog 4-like.
   
 0.772
ENSSRHP00000065402
Mothers against decapentaplegic homolog 4-like.
   
 0.772
ENSSRHP00000067080
Mothers against decapentaplegic homolog 4-like.
   
 0.772
ENSSRHP00000074418
SMAD family member 4a.
   
 0.772
LOC107741768
Mothers against decapentaplegic homolog 4-like.
   
 0.772
LOC107719852
Integrator complex subunit 8-like isoform X1.
   
 0.684
LOC107743055
Mothers against decapentaplegic homolog 2.
   
 0.684
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.