STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000018733F-box and leucine-rich repeat protein 7. (447 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
   
 0.890
skp1-2
S-phase kinase-associated protein 1.
   
 0.890
LOC107727219
Cullin-1-like.
    
 0.792
LOC107713664
Cullin-1-like.
    
 0.792
LOC107741709
Cullin-1-like.
    
 0.792
ENSSRHP00000021773
annotation not available
    
 0.766
LOC107723609
RING-box protein 1-like.
    
 0.766
LOC107748812
E3 ubiquitin-protein ligase RBX1.
    
 0.766
LOC107741656
Polyubiquitin-C isoform X1.
   
 0.717
ENSSRHP00000040657
Cullin 3b.
    
 0.716
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.